Can dplyr package be used for conditional mutating?
Use ifelse
df %>%
mutate(g = ifelse(a == 2 | a == 5 | a == 7 | (a == 1 & b == 4), 2,
ifelse(a == 0 | a == 1 | a == 4 | a == 3 | c == 4, 3, NA)))
Added - if_else: Note that in dplyr 0.5 there is an if_else
function defined so an alternative would be to replace ifelse
with if_else
; however, note that since if_else
is stricter than ifelse
(both legs of the condition must have the same type) so the NA
in that case would have to be replaced with NA_real_
.
df %>%
mutate(g = if_else(a == 2 | a == 5 | a == 7 | (a == 1 & b == 4), 2,
if_else(a == 0 | a == 1 | a == 4 | a == 3 | c == 4, 3, NA_real_)))
Added - case_when Since this question was posted dplyr has added case_when
so another alternative would be:
df %>% mutate(g = case_when(a == 2 | a == 5 | a == 7 | (a == 1 & b == 4) ~ 2,
a == 0 | a == 1 | a == 4 | a == 3 | c == 4 ~ 3,
TRUE ~ NA_real_))
Added - arithmetic/na_if If the values are numeric and the conditions (except for the default value of NA at the end) are mutually exclusive, as is the case in the question, then we can use an arithmetic expression such that each term is multiplied by the desired result using na_if
at the end to replace 0 with NA.
df %>%
mutate(g = 2 * (a == 2 | a == 5 | a == 7 | (a == 1 & b == 4)) +
3 * (a == 0 | a == 1 | a == 4 | a == 3 | c == 4),
g = na_if(g, 0))
Since you ask for other better ways to handle the problem, here's another way using data.table
:
require(data.table)
setDT(df)
df[a %in% c(0,1,3,4) | c == 4, g := 3L]
df[a %in% c(2,5,7) | (a==1 & b==4), g := 2L]
Note the order of conditional statements is reversed to get g
correctly. There's no copy of g
made, even during the second assignment - it's replaced in-place.
On larger data this would have better performance than using nested if-else
, as it can evaluate both 'yes' and 'no' cases, and nesting can get harder to read/maintain IMHO.
Here's a benchmark on relatively bigger data:
# NB: benchmark timings are as of R 3.1.0, data.table v1.9.2
require(data.table)
require(dplyr)
DT <- setDT(lapply(1:6, function(x) sample(7, 1e7, TRUE)))
setnames(DT, letters[1:6])
# > dim(DT)
# [1] 10000000 6
DF <- as.data.frame(DT)
DT_fun <- function(DT) {
DT[(a %in% c(0,1,3,4) | c == 4), g := 3L]
DT[a %in% c(2,5,7) | (a==1 & b==4), g := 2L]
}
DPLYR_fun <- function(DF) {
mutate(DF, g = ifelse(a %in% c(2,5,7) | (a==1 & b==4), 2L,
ifelse(a %in% c(0,1,3,4) | c==4, 3L, NA_integer_)))
}
BASE_fun <- function(DF) { # R v3.1.0
transform(DF, g = ifelse(a %in% c(2,5,7) | (a==1 & b==4), 2L,
ifelse(a %in% c(0,1,3,4) | c==4, 3L, NA_integer_)))
}
system.time(ans1 <- DT_fun(DT))
# user system elapsed
# 2.659 0.420 3.107
system.time(ans2 <- DPLYR_fun(DF))
# user system elapsed
# 11.822 1.075 12.976
system.time(ans3 <- BASE_fun(DF))
# user system elapsed
# 11.676 1.530 13.319
identical(as.data.frame(ans1), as.data.frame(ans2))
# [1] TRUE
identical(as.data.frame(ans1), as.data.frame(ans3))
# [1] TRUE
Not sure if this is an alternative you'd asked for, but I hope it helps.