Cannot configure Fan Speed with pwmconfig

Start out by man fancontrol to get a feel for what variables can be used in /etc/fancontrol. You will need the following when building the config: INTERVAL, FCTEMPS, FCFANS, MINTEMP, MAXTEMP, MINSTART, MINSTOP.

# Checks the temperature every 10 seconds.
INTERVAL=10
# Maps a fan to a temp sensor, each separated by a space 
FCTEMPS=fanpath=temppath fanpath2=temppath2
# Maps a fan to the fan speed sensor
FCFANS=fanpath=fanspeedpath fanpath2=fanspeedpath2
# The temperature below which the fan gets switched to minimum speed.
MINTEMP=fanpath=degreesC fanpath2=degreesC2
# The temperature over which the fan gets switched to maximum speed.
MAXTEMP=fanpath=degreesC fanpath2=degreesC2
# Sets the minimum speed at which the fan begins spinning.
MINSTART=fanpath=minspeed fanpath2=minspeed2
#The minimum speed at which the fan still spins.
MINSTOP=fanpath=minspeed fanpath2=minspeed2

Actual Sample:

INTERVAL=10
FCTEMPS=/sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/pwm5=/sys/devices/platform/coretemp.0/hwmon/hwmon[[:print:]]*/temp3_input /sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/pwm4=/sys/devices/platform/coretemp.0/hwmon/hwmon[[:print:]]*/temp3_input /sys/devices/pci0000:00/0000:00:01.0/0000:01:00.0/hwmon/hwmon[[:print:]]*/pwm1=/sys/devices/platform/coretemp.0/hwmon/hwmon[[:print:]]*/temp3_input
FCFANS=/sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/pwm5=/sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/fan5_input /sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/pwm4=/sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/fan4_input /sys/devices/pci0000:00/0000:00:01.0/0000:01:00.0/hwmon/hwmon[[:print:]]*/pwm1=
MINTEMP=/sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/pwm5=55 /sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/pwm4=50 /sys/devices/pci0000:00/0000:00:01.0/0000:01:00.0/hwmon/hwmon[[:print:]]*/pwm1=55
MAXTEMP=/sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/pwm5=60 /sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/pwm4=60 /sys/devices/pci0000:00/0000:00:01.0/0000:01:00.0/hwmon/hwmon[[:print:]]*/pwm1=60
MINSTART=/sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/pwm5=70 /sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/pwm4=70 /sys/devices/pci0000:00/0000:00:01.0/0000:01:00.0/hwmon/hwmon[[:print:]]*/pwm1=70
MINSTOP=/sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/pwm5=90 /sys/devices/platform/nct6775.656/hwmon/hwmon[[:print:]]*/pwm4=90 /sys/devices/pci0000:00/0000:00:01.0/0000:01:00.0/hwmon/hwmon[[:print:]]*/pwm1=90

The [[:print:]] represent the hwmon number. You can use the actual number or the [[:print:]], sometimes the number changes between boots and the [[:print:]] allows it to find the correct hwmon number.

The issue will be FCFANS, whether fan1_input has valid data, and if not, whether fancontrol will continue to work without that.

Alternatively, you could attempt to write your own script that would set the value of hwmon2/pwm1, it ranges between 0 and 255.