ggplot2 heatmap with colors for ranged values
It's not clear if you want discrete colors or if the colors you list are just markers along the range of Y
. I'll show both.
For discrete colors, use Y1
as joran defines it
dat$Y1 <- cut(dat$Y,breaks = c(-Inf,-3:3,Inf),right = FALSE)
Then you can get a plot with the specific colors you list using a manual scale
p <- ggplot(data = dat, aes(x = Row, y = Col)) +
geom_tile(aes(fill = Y1)) +
scale_fill_manual(breaks=c("\[-Inf,-3)", "\[-3,-2)", "\[-2,-1)",
"\[-1,0)", "\[0,1)", "\[1,2)",
"\[2,3)", "\[3, Inf)"),
values = c("white", "darkblue", "blue",
"lightblue", "lightgreen", "green",
"darkgreen", "white"))
p
I didn't know what you wanted for colours beyond -3 and 3, so I used white.
If you wanted a continuous color, going from blue on the negative through white at 0 to green on the positive, scale_fill_gradient2
would work.
ggplot(data = dat, aes(x = Row, y = Col)) +
geom_tile(aes(fill = Y)) +
scale_fill_gradient2(low="darkblue", high="darkgreen", guide="colorbar")
If you want fine detail control of color, such that the mapping is "darkblue" at 3, "blue" at 2, "lightblue" at 1, "white" at 0, etc., then scale_fill_gradientn
will work for you:
library("scales")
ggplot(data = dat, aes(x = Row, y = Col)) +
geom_tile(aes(fill = Y)) +
scale_fill_gradientn(colours=c("darkblue", "blue", "lightblue",
"white",
"lightgreen", "green", "darkgreen"),
values=rescale(c(-3, -2, -1,
0,
1, 2, 3)),
guide="colorbar")
You have several options for something like this, but here is one as a starting point.
First, use cut
to create a factor from Y
with the appropriate ranges:
dat$Y1 <- cut(dat$Y,breaks = c(-Inf,-3:3,Inf),right = FALSE)
Then plot using a palette from RColorBrewer:
ggplot(data = dat, aes(x = Row, y = Col)) +
geom_tile(aes(fill = Y1), colour = "white") +
scale_fill_brewer(palette = "PRGn")
This color scheme is more purple than blue on the low end, but it's the closest I could find among the brewer palette's.
If you wanted to build your own, you could simply use scale_fill_manual
and specify your desired vector of colors for the values
argument.