R: get list of files but not of directories
The fact that base R does not have a direct method to do this is somewhat appalling. The fact that BASH doesn't have a direct way is also a bit odd.
In my opinion, the best R solution is to simply appeal to the shell:
filenames = system('ls -p | grep -v /', intern=T)
Explanation:
ls -p Append "/" to end of directory names
grep -v Exclude strings matching "/"
intern=T store the output in the variable rather then printing to stdout
Here's one possibility:
all.files <- list.files(rec=F)
all.files[!file.info(all.files)$isdir]
Another option (pattern for files with extensions, not so universal, of course):
Sys.glob("*.*")
setdiff(list.files(), list.dirs(recursive = FALSE, full.names = FALSE))
will do the trick.