Intent Filter with android:autoVerify="true" - never verified at installation, default app links don't work

Fixed this by moving this data tag into a separate intent filter:

<data android:scheme="@string/url_scheme" android:host="open"/>

This is what AndroidManifest looks like now:

<activity android:name="com.mypackage.MyActivity"
          android:launchMode="singleTask">
    <intent-filter tools:node="merge" android:autoVerify="true">
        <data android:scheme="https"
              android:host="@string/branch_io_host"
              android:pathPrefix="@string/branch_io_path_prefix"/>
        <data android:scheme="http"
              android:host="@string/branch_io_host"
              android:pathPrefix="@string/branch_io_path_prefix"/>
        <action android:name="android.intent.action.VIEW"/>
        <category android:name="android.intent.category.DEFAULT"/>
        <category android:name="android.intent.category.BROWSABLE"/>
    </intent-filter>
    <intent-filter>
        <data android:scheme="@string/url_scheme" android:host="open"/>
        <action android:name="android.intent.action.VIEW"/>
        <category android:name="android.intent.category.DEFAULT"/>
        <category android:name="android.intent.category.BROWSABLE"/>
    </intent-filter>
</activity>

Messages from IntentFilter now show up in the log as intended.