kill -3 to get java thread dump

With Java 8 in picture, jcmd is the preferred approach.

jcmd <PID> Thread.print

Following is the snippet from Oracle documentation :

The release of JDK 8 introduced Java Mission Control, Java Flight Recorder, and jcmd utility for diagnosing problems with JVM and Java applications. It is suggested to use the latest utility, jcmd instead of the previous jstack utility for enhanced diagnostics and reduced performance overhead.

However, shipping this with the application may be licensing implications which I am not sure.

The thread dump is written to the system out of the VM on which you executed the kill -3. If you are redirecting the console output of the JVM to a file, the thread dump will be in that file. If the JVM is running in an open console, then the thread dump will be displayed in its console.

There is a way to redirect JVM thread dump output on break signal to separate file with LogVMOutput diagnostic option:

-XX:+UnlockDiagnosticVMOptions -XX:+LogVMOutput -XX:LogFile=jvm.log

You could alternatively use jstack (Included with JDK) to take a thread dump and write the output wherever you want. Is that not available in a unix environment?

jstack PID > outfile