Kuznetsov trace formula, orthogonality of Bessel functions
The Bessel functions $J_\ell$ for $\ell\geq 1$ odd are pairwise orthogonal on the positive axis with respect to the measure $dx/x$. They correspond to the holomorphic spectrum (of various even weights $\ell+1$) of $L^2(\Gamma\backslash H)$. The orthogonal complement of the span of these $J_\ell$'s is continuously (and orthogonally) spanned by the functions $J_{2it}-J_{-2it}$ with $t>0$. This corresponds to the (weight zero and tempered) Maass and Eisenstein spectrum of $L^2(\Gamma\backslash H)$ (of various Laplace eigenvalues $1/4+t^2$). For more details, I recommend Sections 9.3-9.4 in Iwaniec: Introduction to the spectral theory of automorphic forms.
The Bruggeman-Kuznetsov formula is not a weak form of the Selberg trace formula, in fact in many situations it is a more refined (or more suitable) tool than the Selberg trace formula. It can be interpreted as a relative trace formula, see e.g. the paper of Knightly and Li in Acta Arithmetica.
I was acquainted with Nikolay Vasil'evich Kuznetsov while worked in Vladivostok, 1990s. And he was very kind to mee, too. He tought me that many asymptotics for Bessel functions are not valid, many from Erdelyi's book on asymptotics, and some formulas for integral transforms. And as you I do not remember all his lessons, unfortunately. But I think the answer to your question is in this paper or this one.
Fortunately they are digitized officially now by the Steklov Institute project on mathnet.