Matrix notation in ClassicThesis
If bold is out of the question, I might use a script style capital:
\documentclass{article}
\usepackage{amsfonts}
\usepackage{mathtools}
\newcommand\mat[1]{\mathcal{#1}}
\begin{document}
\[
\mat{A}=\begin{bmatrix}1&2\\3&4\end{bmatrix}
\]
\end{document}