Paritition array into N chunks with Numpy

Try numpy.array_split.

From the documentation:

>>> x = np.arange(8.0)
>>> np.array_split(x, 3)
    [array([ 0.,  1.,  2.]), array([ 3.,  4.,  5.]), array([ 6.,  7.])]

Identical to numpy.split, but won't raise an exception if the groups aren't equal length.

If number of chunks > len(array) you get blank arrays nested inside, to address that - if your split array is saved in a, then you can remove empty arrays by:

[x for x in a if x.size > 0]

Just save that back in a if you wish.


Just some examples on usage of array_split, split, hsplit and vsplit:

n [9]: a = np.random.randint(0,10,[4,4])

In [10]: a
Out[10]: 
array([[2, 2, 7, 1],
       [5, 0, 3, 1],
       [2, 9, 8, 8],
       [5, 7, 7, 6]])

Some examples on using array_split:
If you give an array or list as second argument you basically give the indices (before) which to 'cut'

# split rows into 0|1 2|3
In [4]: np.array_split(a, [1,3])
Out[4]:                                                                                                                       
[array([[2, 2, 7, 1]]),                                                                                                       
 array([[5, 0, 3, 1],                                                                                                         
       [2, 9, 8, 8]]),                                                                                                        
 array([[5, 7, 7, 6]])]

# split columns into 0| 1 2 3
In [5]: np.array_split(a, [1], axis=1)                                                                                           
Out[5]:                                                                                                                       
[array([[2],                                                                                                                  
       [5],                                                                                                                   
       [2],                                                                                                                   
       [5]]),                                                                                                                 
 array([[2, 7, 1],                                                                                                            
       [0, 3, 1],
       [9, 8, 8],
       [7, 7, 6]])]

An integer as second arg. specifies the number of equal chunks:

In [6]: np.array_split(a, 2, axis=1)
Out[6]: 
[array([[2, 2],
       [5, 0],
       [2, 9],
       [5, 7]]),
 array([[7, 1],
       [3, 1],
       [8, 8],
       [7, 6]])]

split works the same but raises an exception if an equal split is not possible

In addition to array_split you can use shortcuts vsplit and hsplit.
vsplit and hsplit are pretty much self-explanatry:

In [11]: np.vsplit(a, 2)
Out[11]: 
[array([[2, 2, 7, 1],
       [5, 0, 3, 1]]),
 array([[2, 9, 8, 8],
       [5, 7, 7, 6]])]

In [12]: np.hsplit(a, 2)
Out[12]: 
[array([[2, 2],
       [5, 0],
       [2, 9],
       [5, 7]]),
 array([[7, 1],
       [3, 1],
       [8, 8],
       [7, 6]])]

I believe that you're looking for numpy.split or possibly numpy.array_split if the number of sections doesn't need to divide the size of the array properly.