R devtools fails as "Package libxml-2.0 was not found in the pkg-config search path"
OK so in the end I had to manually install libxml2 even though my system said it allready had the most up to date version installed after: sudo apt-get install libxml2 libxml2-dev
I manually installed based on info found here:
wget ftp://xmlsoft.org/libxml2/libxml2-2.9.2.tar.gz
then after unpacking and moving into the folder:
./configure --prefix=/usr --disable-static --with-history && make
and
sudo make install
after this the R command install.packages("devtools")
completed with success.
Choose and Install suitable library from below as per your Linux flavor:-
- deb: libxml2-dev (Debian, Ubuntu, etc)
- rpm: libxml2-devel (Fedora, CentOS, RHEL)
- csw: libxml2_dev (Solaris)
Install with an appropriate command like apt-get, yum, etc.
From within R prompt, this command works provided that libxml2-dev
has been installed:
Sys.setenv(PKG_CONFIG_PATH="/usr/lib/x86_64-linux-gnu/pkgconfig")