Reinstalling requirement file using pip
You can just go ahead and delete that directory, that's what the message is telling you.
Use:
pip uninstall Django==1.5.4
or
pip uninstall -r requirements.txt
If that still doesn't work, then go into you Python/Lib/site-packages
directory where these packages live, and delete them. Then re-run
pip install -r requirements.txt
and that should work.