fsl atlas code example

Example: fsl atlas

#!/bin/sh

# List co-ordinates of each labeled region in an atlas with fslstats. 
# Use preoption -K < indexMask > will generate seperate n submasks from 
# indexMask, for indexvalues 1..n where n is the maximum index value 
# in indexMask, and generate statistics for each submask.

fslstats -K myLabelAtlas myLabelAtlas -x