The missing Euler Idoneal numbers
If X is an idoneal number, then the class group of discriminant -4X has exponent dividing 2, so the class number is equal to the number of genera (Theorem 6 in Kani's paper: for me, this is the most convenient definition), which is given by an explicit recipe in terms of the number of prime factors of X and its congruence class mod 32 (formula (3) of Kani's paper).
In particular, if X is idoneal and is a prime or twice a prime, then its class number is at most 4. But all discriminants of class number 4 have been calculated. Indeed, all discriminants of class number up to 100 have been calculated (work of M. Watkins), so a new idoneal number should have at least $6$ odd prime divisors, or something like that.
Also see Cox's book Primes of the Form x^2 + ny^2 for treatment of idoneal numbers.
The reference
Weinberger, P. J.: Exponents of the class groups of complex quadratic fields, Acta Arith. 22 (1973), 117–124.
was what Matthias Schütt and I cited for the fact that "there is at most one further imaginary quadratic field with class group exponent 2". (The context is constructing at least one K3 surface for each of the 65 [known] idoneal numbers; see http://arxiv.org/pdf/0809.0830.)
For the specific question about 3 or more primes, Pete Clark's argument reduces this to the solution of the class number $h$ problem for $h=1,2,4$. Mark Watkins' paper
Watkins, M.: Class numbers of imaginary quadratic fields, Math. of Comp. 73 (2003) #246, 907-938
which does all $h \leq 100$, has been mentioned already. He starts by reviewing earlier work, ending with "Arno's thesis [2] and subsequent work with Robinson and Wheeler [3] and the work of Wagner [44], which together complete the classication for all $N \leq 7$ and odd $N \leq 23$." On page 5 of Watkins' paper (immediately following the statement of Lemma 3) he notes that "From Gauss's theory of genera [10], [8], we know that $2^{\omega(d)-1}$ divides $h(-d)$ where $\omega(d)$ is the number of distinct prime factors of d...", which corresponds to Pete's observation.
The paper you have quoted says that if the generalized Riemann hypothesis holds then there are only 65 idoneal numbers(see corollary 23). This agrees with the first comment to your answer. According to the paper the error made that allowed only one more idoneal number is the assumption that it has been proved that there are no idoneal even numbers greater than 1848(see remark 24). So if the generalized Riemann hypothesis does not hold that does not imply that there are additional idoneal numbers. Even if there were more there still could be one more odd idoneal number. It is only if the idoneal number after 1848 is even that 4 times that number will also be idoneal.