vertical & horizontal lines in matplotlib

If you want to add a bounding box, use a rectangle:

ax = plt.gca()
r = matplotlib.patches.Rectangle((.5, .5), .25, .1, fill=False)
ax.add_artist(r)

Rectangle doc

This may be a common problem for new users of Matplotlib to draw vertical and horizontal lines. In order to understand this problem, you should be aware that different coordinate systems exist in Matplotlib.

The method axhline and axvline are used to draw lines at the axes coordinate. In this coordinate system, coordinate for the bottom left point is (0,0), while the coordinate for the top right point is (1,1), regardless of the data range of your plot. Both the parameter xmin and xmax are in the range [0,1].

On the other hand, method hlines and vlines are used to draw lines at the data coordinate. The range for xmin and xmax are the in the range of data limit of x axis.

Let's take a concrete example,

import matplotlib.pyplot as plt
import numpy as np

x = np.linspace(0, 5, 100)
y = np.sin(x)

fig, ax = plt.subplots()

ax.plot(x, y)
ax.axhline(y=0.5, xmin=0.0, xmax=1.0, color='r')
ax.hlines(y=0.6, xmin=0.0, xmax=1.0, color='b')

plt.show()

It will produce the following plot:

The value for xmin and xmax are the same for the axhline and hlines method. But the length of produced line is different.

The pyplot functions you are calling, axhline() and axvline() draw lines that span a portion of the axis range, regardless of coordinates. The parameters xmin or ymin use value 0.0 as the minimum of the axis and 1.0 as the maximum of the axis.

Instead, use plt.plot((x1, x2), (y1, y2), 'k-') to draw a line from the point (x1, y1) to the point (x2, y2) in color k. See pyplot.plot.