What is the equation of a general circle in 3-D space?
$\newcommand{\Reals}{\mathbf{R}}\newcommand{\Vec}{\mathbf{v}}$A circle in $\Reals^{3}$ doesn't exactly have "an equation" in the sense that a circle in the plane or a sphere in space has an equation. Intuitively, "an equation" cuts down the dimension by one, but to get a circle in space you have to lower the dimension by two. (A small piece of a circle looks like a line, so a circle is "one dimensional" for present purposes.)
Here are a few alternative descriptions that you may find helpful or interesting.
(Parametric) If $\Vec_{1}$ and $\Vec_{2}$ are orthogonal unit vectors in $\Reals^{3}$, $p$ is an arbitrary point, and $r > 0$ is real, then the set of points of the form $$ p + r(\cos t) \Vec_{1} + r(\sin t) \Vec_{2},\quad \text{$t$ real,} $$ is the circle with center $p$ and radius $r$ lying in the plane parallel to $\Vec_{1}$ and $\Vec_{2}$. (The same technique describes an arbitrary circle in $\Reals^{n}$ for $n \geq 2$.)
(Intersection of a sphere and a plane) Suppose $p = (x_{0}, y_{0}, z_{0})$ is an arbitrary point, $r > 0$ is real, and $n = (a, b, c)$ is a non-zero vector, then the common solution set of the equations $$ (x - x_{0})^{2} + (y - y_{0})^{2} + (z - z_{0})^{2} = r^{2},\quad a(x - x_{0}) + b(y - y_{0}) + c(z - z_{0}) = 0 $$ is the circle with center $p$ and radius $r$ lying in the plane orthogonal to $n$.
(Degenerate equation) You can write down a single polynomial in three variables whose zero set is a circle, but the resulting equation is "degenerate" in the sense that every point of the circle is a multiple root of the polynomial. For example, $$ \bigl((x^{2} + y^{2}) - 1\bigr)^{2} + z^{2} = 0 $$ "cuts out" the unit circle in the $(x, y)$-plane of $\Reals^{3}$; the only way the left-hand side can vanish is if each summand vanishes, so that $x^{2} + y^{2} = 1$ and $z = 0$. To do this in general, you can use the equations from the preceding bullet point: $$ \bigl((x - x_{0})^{2} + (y - y_{0})^{2} + (z - z_{0})^{2} - r^{2}\bigr)^{2} + \bigl(a(x - x_{0}) + b(y - y_{0}) + c(z - z_{0})\bigr)^{2} = 0. $$
Hint: A circle is the intersection of a sphere with a plane.
To specify a circle in 3D, you need to know its center, its radius, and also how it's "tilted", which means which plane it lives in. So you will need two equations, one defining the relevant sphere (which specifies the center and radius) and one defining the relevant plane (which specifies the tilt).